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| Class Summary | |
|---|---|
| AlignmentGUI | This is the graphical interface for showing alignments. |
| CNetworkView | The graphical interface for showing the current network. |
| ColorGradient | |
| DistanceGUI | |
| EntropyGUI | This class implements the graphical interface for showing the observed, expected, and individual sample entropies of a given alignment space. |
| InputGUI | This is the graphical interface for showing the input data |
| LogLikelihoodTraceGUI | This class implements the graphical interface for showing the log-likelihood plot. |
| PPFoldGUI | |
| StructAlignTraceGUI | This class implements the graphical interface for showing the trace plots for the StructAlign parameters. |
| StructureDetails | |
| StructureGUI | |
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