statalign.postprocess.plugins.contree
Class Cluster

java.lang.Object
  java.util.AbstractCollection<E>
      java.util.AbstractList<E>
          java.util.ArrayList<TreeNode>
              statalign.postprocess.plugins.contree.Cluster

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, java.lang.Comparable<java.util.ArrayList<TreeNode>>, java.lang.Iterable<TreeNode>, java.util.Collection<TreeNode>, java.util.List<TreeNode>, java.util.RandomAccess

public class Cluster
extends java.util.ArrayList<TreeNode>
implements java.lang.Comparable<java.util.ArrayList<TreeNode>>

See Also:

Serialized Form

Field Summary

java.util.BitSet	aboveSplit
boolean	added
double	edgeLength
boolean	isMajority
int	nodeRefA
int	nodeRefB
int	noOfOccurrences

Constructor Summary

Cluster()

Method Summary

int	compareTo(java.util.ArrayList<TreeNode> other)

Methods inherited from class java.util.ArrayList

add, add, addAll, addAll, clear, clone, contains, ensureCapacity, get, indexOf, isEmpty, lastIndexOf, remove, remove, set, size, toArray, toArray, trimToSize

Methods inherited from class java.util.AbstractList

equals, hashCode, iterator, listIterator, listIterator, subList

Methods inherited from class java.util.AbstractCollection

containsAll, removeAll, retainAll, toString

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.List

containsAll, equals, hashCode, iterator, listIterator, listIterator, removeAll, retainAll, subList

Field Detail

noOfOccurrences

public int noOfOccurrences

edgeLength

public double edgeLength

aboveSplit

public java.util.BitSet aboveSplit

nodeRefA

public int nodeRefA

nodeRefB

public int nodeRefB

added

public boolean added

isMajority

public boolean isMajority

Constructor Detail

Cluster

public Cluster()

Method Detail

compareTo

public int compareTo(java.util.ArrayList<TreeNode> other)

Specified by:

compareTo in interface java.lang.Comparable<java.util.ArrayList<TreeNode>>