statalign.base
Class McmcStep

java.lang.Object
  statalign.base.McmcStep

public class McmcStep
extends java.lang.Object

Provides information on an MCMC step and additional MCMC statistics.

Author:

novak

Field Summary

boolean	accepted true if this step was accepted
double	bpp log of (backproposal probability / proposal probability)
boolean	burnIn true if this step was proposed in the burn-in period
double	heat heat of the chain
double	newLogLike loglikelihood after this step (accepted ?
double	oldLogLike loglikelihood before this step
double	proposedLogLike loglikelihood of proposed step

Constructor Summary

McmcStep()

Method Summary

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

burnIn

public boolean burnIn

true if this step was proposed in the burn-in period

oldLogLike

public double oldLogLike

loglikelihood before this step

proposedLogLike

public double proposedLogLike

loglikelihood of proposed step

newLogLike

public double newLogLike

loglikelihood after this step (accepted ? proposedLogLike : oldLogLike)

heat

public double heat

heat of the chain

bpp

public double bpp

log of (backproposal probability / proposal probability)

accepted

public boolean accepted

true if this step was accepted

Constructor Detail

McmcStep

public McmcStep()