Uses of Class
statalign.mcmc.ProposalDistribution

Packages that use ProposalDistribution
statalign.base.mcmc   
statalign.mcmc   
statalign.model.ext.plugins.structalign   
 

Uses of ProposalDistribution in statalign.base.mcmc
 

Constructors in statalign.base.mcmc with parameters of type ProposalDistribution
AllEdgeMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
EdgeMove(McmcModule m, int edgeIndex, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, double propVar, java.lang.String n)
           
EdgeMove(McmcModule m, int edgeIndex, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
IndelMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
LambdaMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
MuMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
PhiMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
RhoMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
RMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
ThetaMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
 

Uses of ProposalDistribution in statalign.mcmc
 

Subclasses of ProposalDistribution in statalign.mcmc
 class GammaProposal
           
 class GaussianProposal
           
 class LogisticProposal
          Proposal distribution for variables whose support is [0,1].
 class MultiplicativeProposal
          Proposal that multiplies the current parameter by a log-normally distributed variable, which is equivalent to a Gaussian random walk on the logarithm of the parameter.
 class UniformProposal
           
 

Constructors in statalign.mcmc with parameters of type ProposalDistribution
ContinuousPositiveParameterMove(McmcModule m, ParameterInterface p, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
 

Uses of ProposalDistribution in statalign.model.ext.plugins.structalign
 

Constructors in statalign.model.ext.plugins.structalign with parameters of type ProposalDistribution
ContinuousPositiveStructAlignMove(StructAlign s, ParameterInterface p, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)
           
HierarchicalContinuousPositiveStructAlignMove(StructAlign s, ParameterInterface p, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)