Uses of Class
statalign.base.thread.StoppedException

Packages that use StoppedException

statalign.base
statalign.base.thread

Uses of StoppedException in statalign.base

Methods in statalign.base that throw StoppedException

void	TreeAlgo.addAlignSeqsToTree(Tree tree, java.lang.String[] sequences, java.lang.String[] names, SubstitutionModel model, java.lang.String filename)
Tree	TreeAlgo.buildNJTree(java.lang.String[] sequences, java.lang.String[] names, SubstitutionModel model, java.lang.String filename)

Uses of StoppedException in statalign.base.thread

Methods in statalign.base.thread that throw StoppedException

void

Stoppable.stoppable() Should be called from methods of the descendant classes at points where execution is allowed to be stopped by an external thread (by calling the StoppableThread's stopSoft() method) If this happens, a StoppedException is thrown that can be caught at any point within the StoppableThread to do things up before exiting.