Uses of Class
statalign.model.subst.plugins.AminoAcidModel

Packages that use AminoAcidModel

statalign.model.subst.plugins

Uses of AminoAcidModel in statalign.model.subst.plugins

Subclasses of AminoAcidModel in statalign.model.subst.plugins

class	Blosum Implements the 'rate-matricized' Blosum substitution model.
class	CpRev This class implements the Chloroplast reversible substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/10795826
class	Dayhoff Implements the classic Dayhoff substitution model.
class	Jones Implements the JTT (Jones-Taylor-Thornton) substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/1633570
class	MtMam Implements the mammalian mitochondrial substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/9732458
class	MtREV Implements the reversible mitochondrial substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/8642615
class	RtREV Implements the retrovirus substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/12165843
class	Vt Implements the Müller-Vingron substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/11382360
class	Wag Implements the WAG (Whelan & Goldman model) substitution model, see also http://www.ncbi.nlm.nih.gov/pubmed/11319253