Uses of Class
statalign.base.Mcmc

Packages that use Mcmc

statalign.base.mcmc
statalign.mcmc
statalign.model.ext
statalign.postprocess
statalign.postprocess.plugins

Uses of Mcmc in statalign.base.mcmc

Constructors in statalign.base.mcmc with parameters of type Mcmc

CoreMcmcModule(Mcmc mc, ModelExtManager m)

Uses of Mcmc in statalign.mcmc

Methods in statalign.mcmc with parameters of type Mcmc

void	McmcModule.setMcmc(Mcmc m)

Uses of Mcmc in statalign.model.ext

Methods in statalign.model.ext that return Mcmc

Mcmc	ModelExtManager.getMcmc() Allows access to the Mcmc class.

Methods in statalign.model.ext with parameters of type Mcmc

void	ModelExtManager.setMcmc(Mcmc mcmc)

Uses of Mcmc in statalign.postprocess

Fields in statalign.postprocess declared as Mcmc

Mcmc	PostprocessManager.mcmc This is the Mcmc that is analyzed
Mcmc	Postprocess.mcmc TODO: REMOVE!!!!!!!!!!

Uses of Mcmc in statalign.postprocess.plugins

Methods in statalign.postprocess.plugins with parameters of type Mcmc

static com.ppfold.algo.Tree

PPFold.getPPfoldTree(Mcmc mcmc)