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| Class Summary | |
|---|---|
| AlignmentMove | |
| AllEdgeMove | |
| CoreMcmcModule | curLogLike for this McmcModule includes the contributions from the ModelExtensions. |
| EdgeMove | |
| IndelMove | |
| LambdaMove | |
| LOCALTopologyMove | |
| MuMove | |
| PhiMove | |
| RhoMove | |
| RMove | |
| SilentIndelMove | |
| SubstMove | |
| ThetaMove | |
| TopologyMove | |
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