statalign.base.mcmc
Class IndelMove

java.lang.Object
  statalign.mcmc.McmcMove
      statalign.mcmc.ContinuousPositiveParameterMove
          statalign.base.mcmc.IndelMove

Direct Known Subclasses:

LambdaMove, MuMove, PhiMove, RhoMove, RMove, ThetaMove

public abstract class IndelMove
extends ContinuousPositiveParameterMove

Field Summary

Fields inherited from class statalign.mcmc.McmcMove

acceptAllDuringFirstHalfBurnin, acceptanceCount, autoTune, lastMoveAccepted, lowCounts, maxAcceptance, maxProposalWidthControlVariable, minAcceptance, moveProposed, name, proposalCount, proposalWidthControlVariable, spanMultiplier

Constructor Summary

IndelMove(McmcModule m, PriorDistribution<java.lang.Double> pr, ProposalDistribution<java.lang.Double> prop, java.lang.String n)

Method Summary

void	afterMove(java.lang.Object externalState)
void	copyState(java.lang.Object externalState)
void	restoreState(java.lang.Object externalState)
void	updateLikelihood(java.lang.Object externalState)

Methods inherited from class statalign.mcmc.ContinuousPositiveParameterMove

logPriorDensity, proposal, setMaxValue, setMinValue, updateProposal

Methods inherited from class statalign.mcmc.McmcMove

acceptanceRate, afterFirstHalfBurnin, getOwner, getParam, getTime, isParamChangeAccepted, move

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

IndelMove

public IndelMove(McmcModule m,
                 PriorDistribution<java.lang.Double> pr,
                 ProposalDistribution<java.lang.Double> prop,
                 java.lang.String n)

Method Detail

copyState

public void copyState(java.lang.Object externalState)

Overrides:

copyState in class ContinuousPositiveParameterMove

afterMove

public void afterMove(java.lang.Object externalState)

Overrides:

afterMove in class McmcMove

updateLikelihood

public void updateLikelihood(java.lang.Object externalState)

Specified by:

updateLikelihood in class ContinuousPositiveParameterMove

restoreState

public void restoreState(java.lang.Object externalState)

Overrides:

restoreState in class ContinuousPositiveParameterMove